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JHU Biomedical Engineering Primary Faculty

Joel Bader, Ph.D.

Bioinformatics and Computational Biology Lab
Clark Hall 201C
(410) 516-7417
joel.bader AT jhu.edu
Website

Research Interests

• Synthetic yeast: We are redesigning the yeast genome to reveal deep properties of evolution.
• Algorithms to discover modules in networks.
• Wiring diagrams for cells and organisms
• Anchoring protein pathways with genetic screens
• Evolution of biological networks
• Whole genome association

Selected Publications

Huang H, Jedynak BM, Bader JS. 2007. Where Have All the Interactions Gone? Estimating the Coverage of Two-Hybrid Protein Interaction Maps. PLoS Comput Biol 3(11): e214.

Liu LA, Bader JS. 2007. Ab initio prediction of transcription factor binding sites. Pac. Symp. Biocomp. 12: 484-495.

Stuart LM, Boulais J, Charriere GM, Hennessy EJ, Brunet S, Jutras I, Goyette G, Rondeau C, Letarte S, Huang H, Ye P, Morales F, Kocks C, Bader JS, Desjardins M, Ezekowitz RA. A systems biology analysis of the Drosophila phagosome. Nature. 2007 Jan 4;445(7123):95-101. Epub 2006 Dec 6. PMID: 17151602

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